CDS

Accession Number TCMCG060C24993
gbkey CDS
Protein Id XP_002512596.1
Location complement(join(2079834..2080044,2080184..2080474,2080899..2081715,2082259..2084314))
Gene LOC8274978
GeneID 8274978
Organism Ricinus communis

Protein

Length 1124aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA34677
db_source XM_002512550.3
Definition phytochrome A [Ricinus communis]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCCTCGAGACCCAGCCACTCATCCAGCAATTCTGTGAGATCAAGGCACAGTGCTAGGATTATTTCCCAGACCGCTGTAGATGCAAAGCTTCATGCAGATTTTGAGGAGTCGGGCAGTTCATTTGACTACTCAAACTCTGTGCATGTTACCAGTTCTACTGGTTTAGATCATGCACCCAGGTCAGACAAAGTAACCACAGCTTATCTTCATCATATACAGAAAGGGAAGCTGATCCAGCCTTTTGGCTGCTTGCTAGCCTTAGATGAAAAAACATACAAGGTTATTGCATATAGTGAGAATGCCCCTGAAATGTTGACCATGGTTAGTCATGCAGTTCCAAGTGTTGGGGATCACCCAGTTCTTGGTATTGGAACTGACATAAGGACTATCTTCACTGCACCCAGTGCCTCTGCCTTGCAGAAAGCTCTAGGATTTGGTGATGTTTCTCTATTGAATCCCATTTTAGTCCATTGCAAGACTTCCGGGAAGCCCTTCTATGCTATTGTCCATCGGGTAACTGGTAGTTTTATAATCGACTTTGAACCAGTAAAACCATATGAGGTCCCCATGACTGCTGCAGGGGCCTTGCAGTCATATAAGCTTGCCGCTAAAGCAATTTCCCGGTTGCAGTCATTGCCTAGTGGGAGTATGGAAAGGCTTTGTGATACAATGGTTCAGGAGGTTTTTGAGCTCACTGGTTATGACAGGGTGATGACTTATAAATTTCATGATGATGACCATGGAGAAGTTATCTCTGAGGTCACAAAGCCCGGTTTAGAGCCATATTTGGGTCTGCATTATCCTGCCACTGATATTCCTCAGGCTGCACGATTTTTATTTATGAAGAATAAGGTCCGAATGATTGTTGATTGCCGTGCAAAACATGTCAAGGTGCTACAAGATGAGAAGCTTCCATTAGAACTAACCTTGTGCGGATCAACCCTAAGGGCCCCACACAGTTGCCATCTACAGTATATGGAGAACATGGACTCCGTTGCTTCTCTGGTTATGGCAGTTGTGGTCAATGAAGGAGATGAAGATGATGATAGTCCTACTTCTGTGCAACCACAGAAAAGAAAGAGACTTTGGGGTTTAGTAGTATGCCATAATACAACTCCACGATTTGTTCCATTCCCTCTAAGGTATGCCTGTGAGTTTCTAGCTCAAGTCTTTGCTATTCATGTCAACAAGGAATTGGAATTGGAAAATCAGATTGTTGAAAAGAACATCCTGCGCACCCAGACACTCTTATGCGATATGTTGCTGCGAGATGCTCCTTTGGGTATTCTGACACAAAGTCCAAATATAACAGATCTTGTGAAGTGTGATGGAGCTGCACTATTGTACAAGAACAAGATATGGAGGTTGGGAGTAACTCCCAGTGATCTCCAAATTCGAGATATAGCTGTGTGGCTCTCAGAGTATCATATGGATTCCACAGGCTTAAGTACAGATAGCTTGTATGATGCTGGATACTCAGCTGCTCTGTCTCTTGAGGATGTAGTTTGTGGAATGGCAGCTGTGAGAATAACTTCCAAGGACATGCTCTTTTGGTTTAGGGCTCCGACTGCTGCAGAAATTCGATGGGGTGGAGCCAAACATGAACCTGGTGAGAAGGATGACGGTAGGAAGATGCACCCAAGATCATCCTTCAAGGCCTTCCTTGAAGTTGTCAAGACAAGGAGTTTGCCTTGGAAGGACTATGAAATGGATGCAATCCATTCTCTTCAGCTTATACTGCGGAATGCTTTCAAAGATGCTGAAACCATGGATGCGGATGCCAAAGCAATTCATTCGAGGCTTAGTGACCTCAAAATTGAAGGGATGCAAGAATTGGAAGCGGTTACTAGTGAGATGGTCAGATTAATAGAAACAGCCACAGTGCCAATTTTGGCAGTTGATGTTGATGGACTTGTTAATGGGTGGAATACAAAAATTGCTGAGTTGACAGGTCTTCCTGTCGATAAAGCAATTGGGAAGCATTTGCTGACACTCGTGGAAGATGGTTCAATTGACTTAGTAAAAAACATGCTGTTCTCAGCCCTGCAAGGCAAAGAGGAGCAAAATATTCAATTTGAAATCAAAACGCATGGGTCAAAGGTTGAAAGTGGCCCCATCAGCTTAGTTGTTAATGCTTGCGCAAGCAGGGACATTAGTGAAAATGTTGTTGGGGTATGTTTTGTGGCTCAAGATATCACAGGCCAGAAGACAGTTATGGATAAGTTCACTCGGATTGAAGGTGACTACAAAGCAATCGTACAAAATCCAAACCCATTGATCCCCCCAATATTTGGAACGGATGAGTTTGGTTGGTGTTCTGAGTGGAATCCAGCAATGGCAAAATTGACTGGATGGAAGCGAGAGGAAGTGATGGATAAAATGCTTTTGGGGGAGGTTTTTGGGATCAACAGGGCTTGCTGTTGTCTGAAAAATCAAGAAGCCTTTGTAAATCTTGGGGTATTAATTAATAATGCCATGACTAGCCAGGTACCTGAAAAGGTTTCTTTCAGCTTCTTTGCTCGGAACAAGAAGTATGTGGAATGCTTATTGTGTGTGAGTAAGAAATTGGACAGAGAGGGTGCTGTTACTGGGGTCTTCTGCTTCCTGCAGCTTGCAAGCCAAGAATTGCAACAAGCACTTCATATCCAGCGATTATCAGAGCAAACTGCTTTGAAAAGATTGAAAACACTAGCTTATATAAAAAGGCAGATACAGAATCCCCTTTCTGGGATTATGTTTTCTCGGAAATTAATGGAGATTACTGAATTGGATGCAGAACAAAAGCAGCTTCTGCATACTAGTGCCCAGTGTCAGCGCCAACTAAGCAAAATTCTTGATGACTCGGATATTGATAGCATTGTTGAAGGCTACTTGGATTTGGAAATGGTCGAGTTTACTCTGCATGAGGTACTAATTGCAGCCATCAGTCAAGTCACAATAAAGAGCAAAGGAAAGGGCATACGAATAGTCAATGATGCTGCTGAAGTGATCATGACTGAAACCTTATATGGTGATAGCATTAGGCTTCAACAGGTGTTAGCTGACTTCTTAGCTGCTTCAGTAGACTTTACACCGCCTGGAGGCCAGCTTACAATTGCAGCTAAGTTTACTAAGGATCAGTTAGGGCAATCAGTTCATCTTGTGCATCTGGAGCTCAGGATAACGCATGCTGGTGGTGGGATACCTGAACCGTTACTGAACCAAATGTTCGGTAGTGATGGAGATGTCTCTGATGAGGGCGTCAGCCTGTTTATCAGTCGAAAGTTGGTGAAGCTCATGAATGGAGATGTACAGTACTTGAGGGAAGCAGGAAAGTCAAGTTTTATCGTAACAGTTGAACTTGCAGCCGGCCGTAAGTCACAGGCGTAA
Protein:  
MSSSRPSHSSSNSVRSRHSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPSASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTLRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSPNITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSAALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLVKNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDKMLLGEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIMFSRKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDLEMVEFTLHEVLIAAISQVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAASVDFTPPGGQLTIAAKFTKDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSDEGVSLFISRKLVKLMNGDVQYLREAGKSSFIVTVELAAGRKSQA